Shows the used and available memory for OmicsBox. In blue the CPU utilisation of the last minute can be seen.
Shows general application message as well as summary information of specific job executions.
A window which provides information about application updates and new features.
This tab provides process information of any job execution in OmicsBox. Each job can be cancelled as well as a more detailed message tab can be opened.
The Cloud Usage provides information about the number of consumed/ recharged Cloud Units or processed sequences and success jobs.
The Excel icon on the top right in Figure 1 allows exporting the table in csv format.
The Filter option allows to limit the table to a specific rage of dates.
The following features that run on the BioBam Bioinformatics Cloud Platform are:
Functional Analysis: CloudIPS (paid), CloudBlast (paid), GO Mapping, EggNOG, Annotation
Transcriptomics: Trinity*, BUSCO, TransDecoder, CD-HIT, STAR*, BWA*, RSEM*, EdgeR, maSigPro, NOISeq
Metagenomics: Kraken, MEGAHIT, meta-SPAdes, FragGeneScan, Prodigal, PfamScan, EggNOG Mapper
Genome Analysis: Flye,* ABySS*, SPAdes*, Pilon*, BWA*, RepeatMasker, Augustus, Glimmer
Apps: CPAT, PSORTb, MLST
These algorithms make use of free cloud computation resources. This is an introductory offer and may change in a future release depending on the overall resource consumption of these features.
Figure 1: Cloud Usage